Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Shank1D3YZU1 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.69□□□□□ -0.22
Shank1D3YZU1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.69□□□□□ -0.22
Shank1D3YZU1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shank1D3YZU1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Gm14719-201ENSMUST00000121891 340 ntBASIC13.68□□□□□ -0.22
Shank1D3YZU1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.68□□□□□ -0.22
Shank1D3YZU1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Mir7684-201ENSMUST00000183858 60 ntBASIC13.68□□□□□ -0.22
Shank1D3YZU1 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.68□□□□□ -0.22
Shank1D3YZU1 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shank1D3YZU1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shank1D3YZU1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shank1D3YZU1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Gm12490-201ENSMUST00000120255 560 ntBASIC13.66□□□□□ -0.22
Shank1D3YZU1 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Gm24158-201ENSMUST00000175263 71 ntBASIC13.66□□□□□ -0.22
Shank1D3YZU1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Gm2272-201ENSMUST00000194903 582 ntBASIC13.66□□□□□ -0.22
Shank1D3YZU1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shank1D3YZU1 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms