Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syce3B5KM66 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syce3B5KM66 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Syce3B5KM66 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syce3B5KM66 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syce3B5KM66 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syce3B5KM66 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Syce3B5KM66 Mir5130-201ENSMUST00000175160 84 ntBASIC17.52■□□□□ 0.4
Syce3B5KM66 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Syce3B5KM66 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Syce3B5KM66 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Syce3B5KM66 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syce3B5KM66 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Syce3B5KM66 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Syce3B5KM66 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Syce3B5KM66 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Syce3B5KM66 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Syce3B5KM66 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Syce3B5KM66 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syce3B5KM66 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Syce3B5KM66 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Syce3B5KM66 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.51■□□□□ 0.39
Syce3B5KM66 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.51■□□□□ 0.39
Syce3B5KM66 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.51■□□□□ 0.39
Syce3B5KM66 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.51■□□□□ 0.39
Syce3B5KM66 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syce3B5KM66 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syce3B5KM66 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Syce3B5KM66 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Syce3B5KM66 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syce3B5KM66 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Syce3B5KM66 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syce3B5KM66 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syce3B5KM66 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syce3B5KM66 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Syce3B5KM66 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Syce3B5KM66 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Syce3B5KM66 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syce3B5KM66 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.5■□□□□ 0.39
Syce3B5KM66 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Syce3B5KM66 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Syce3B5KM66 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syce3B5KM66 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.5■□□□□ 0.39
Syce3B5KM66 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syce3B5KM66 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.5■□□□□ 0.39
Syce3B5KM66 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.5■□□□□ 0.39
Syce3B5KM66 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.5■□□□□ 0.39
Syce3B5KM66 Gm8520-201ENSMUST00000186517 868 ntBASIC17.5■□□□□ 0.39
Syce3B5KM66 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.5■□□□□ 0.39
Syce3B5KM66 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.5■□□□□ 0.39
Syce3B5KM66 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syce3B5KM66 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.5■□□□□ 0.39
Syce3B5KM66 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syce3B5KM66 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syce3B5KM66 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syce3B5KM66 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Syce3B5KM66 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syce3B5KM66 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syce3B5KM66 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Syce3B5KM66 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syce3B5KM66 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syce3B5KM66 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syce3B5KM66 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Syce3B5KM66 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syce3B5KM66 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syce3B5KM66 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syce3B5KM66 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Syce3B5KM66 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syce3B5KM66 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syce3B5KM66 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Syce3B5KM66 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.49■□□□□ 0.39
Syce3B5KM66 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.49■□□□□ 0.39
Syce3B5KM66 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.49■□□□□ 0.39
Syce3B5KM66 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syce3B5KM66 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Syce3B5KM66 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syce3B5KM66 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syce3B5KM66 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Syce3B5KM66 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.49■□□□□ 0.39
Syce3B5KM66 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syce3B5KM66 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syce3B5KM66 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syce3B5KM66 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Syce3B5KM66 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syce3B5KM66 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.48■□□□□ 0.39
Syce3B5KM66 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syce3B5KM66 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC17.48■□□□□ 0.39
Syce3B5KM66 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syce3B5KM66 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syce3B5KM66 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syce3B5KM66 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Syce3B5KM66 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Syce3B5KM66 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syce3B5KM66 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Syce3B5KM66 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syce3B5KM66 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syce3B5KM66 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syce3B5KM66 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Syce3B5KM66 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.48■□□□□ 0.39
Syce3B5KM66 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms