Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm15808-201ENSMUST00000119046 604 ntBASIC11.43□□□□□ -0.58
Col6a5A6H584 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.43□□□□□ -0.58
Col6a5A6H584 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Col6a5A6H584 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.43□□□□□ -0.58
Col6a5A6H584 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.43□□□□□ -0.58
Col6a5A6H584 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.43□□□□□ -0.58
Col6a5A6H584 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.43□□□□□ -0.58
Col6a5A6H584 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Col6a5A6H584 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a5A6H584 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.42□□□□□ -0.58
Col6a5A6H584 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Col6a5A6H584 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Col6a5A6H584 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.42□□□□□ -0.58
Col6a5A6H584 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Col6a5A6H584 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Col6a5A6H584 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Col6a5A6H584 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Col6a5A6H584 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Col6a5A6H584 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Gm18056-201ENSMUST00000207670 568 ntBASIC11.42□□□□□ -0.58
Col6a5A6H584 Gm18061-201ENSMUST00000208350 562 ntBASIC11.42□□□□□ -0.58
Col6a5A6H584 Gm18063-201ENSMUST00000208529 568 ntBASIC11.42□□□□□ -0.58
Col6a5A6H584 Gm18052-201ENSMUST00000208750 559 ntBASIC11.42□□□□□ -0.58
Col6a5A6H584 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Col6a5A6H584 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Col6a5A6H584 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Col6a5A6H584 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Col6a5A6H584 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.42□□□□□ -0.58
Col6a5A6H584 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.42□□□□□ -0.58
Col6a5A6H584 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a5A6H584 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Col6a5A6H584 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Gm5187-201ENSMUST00000117317 991 ntBASIC11.41□□□□□ -0.58
Col6a5A6H584 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Col6a5A6H584 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Col6a5A6H584 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.41□□□□□ -0.58
Col6a5A6H584 Gm7593-201ENSMUST00000187246 644 ntBASIC11.41□□□□□ -0.58
Col6a5A6H584 Gm24526-201ENSMUST00000082921 158 ntBASIC11.41□□□□□ -0.58
Col6a5A6H584 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Col6a5A6H584 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.41□□□□□ -0.58
Col6a5A6H584 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Col6a5A6H584 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.41□□□□□ -0.58
Col6a5A6H584 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Col6a5A6H584 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.41□□□□□ -0.58
Col6a5A6H584 Mir8109-201ENSMUST00000184375 117 ntBASIC11.41□□□□□ -0.58
Col6a5A6H584 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.41□□□□□ -0.58
Col6a5A6H584 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.41□□□□□ -0.58
Col6a5A6H584 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.41□□□□□ -0.58
Col6a5A6H584 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Col6a5A6H584 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC11.41□□□□□ -0.58
Col6a5A6H584 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms