Protein–RNA interactions for Protein: A2AT37

Upf2, UPF2 regulator of nonsense transcripts homolog (yeast), mousemouse

Known RBP Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf2A2AT37 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Upf2A2AT37 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Upf2A2AT37 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Upf2A2AT37 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Upf2A2AT37 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Upf2A2AT37 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Upf2A2AT37 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Upf2A2AT37 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.02■□□□□ 0.8
Upf2A2AT37 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Upf2A2AT37 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Upf2A2AT37 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Upf2A2AT37 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Upf2A2AT37 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Upf2A2AT37 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Upf2A2AT37 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Upf2A2AT37 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Upf2A2AT37 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Upf2A2AT37 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC20.02■□□□□ 0.8
Upf2A2AT37 Gm37305-201ENSMUST00000195714 4279 ntBASIC20.02■□□□□ 0.8
Upf2A2AT37 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Upf2A2AT37 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Upf2A2AT37 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Upf2A2AT37 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Upf2A2AT37 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC20.02■□□□□ 0.79
Upf2A2AT37 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Upf2A2AT37 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Upf2A2AT37 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Upf2A2AT37 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Upf2A2AT37 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upf2A2AT37 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upf2A2AT37 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upf2A2AT37 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upf2A2AT37 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Upf2A2AT37 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upf2A2AT37 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Upf2A2AT37 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.01■□□□□ 0.79
Upf2A2AT37 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Upf2A2AT37 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upf2A2AT37 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upf2A2AT37 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upf2A2AT37 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Upf2A2AT37 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upf2A2AT37 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upf2A2AT37 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upf2A2AT37 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upf2A2AT37 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upf2A2AT37 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upf2A2AT37 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20■□□□□ 0.79
Upf2A2AT37 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Upf2A2AT37 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Upf2A2AT37 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Upf2A2AT37 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 AC117588.1-201ENSMUST00000228510 999 ntBASIC20■□□□□ 0.79
Upf2A2AT37 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20■□□□□ 0.79
Upf2A2AT37 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Upf2A2AT37 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC20■□□□□ 0.79
Upf2A2AT37 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Upf2A2AT37 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC20■□□□□ 0.79
Upf2A2AT37 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upf2A2AT37 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Upf2A2AT37 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Upf2A2AT37 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upf2A2AT37 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Upf2A2AT37 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upf2A2AT37 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upf2A2AT37 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upf2A2AT37 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upf2A2AT37 Gm8344-201ENSMUST00000119813 856 ntBASIC19.99■□□□□ 0.79
Upf2A2AT37 Gm23634-201ENSMUST00000175071 91 ntBASIC19.99■□□□□ 0.79
Upf2A2AT37 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upf2A2AT37 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.99■□□□□ 0.79
Upf2A2AT37 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upf2A2AT37 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upf2A2AT37 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upf2A2AT37 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms