Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Gm24158-201ENSMUST00000175263 71 ntBASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Gm22175-201ENSMUST00000175007 78 ntBASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3aA2ASI5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3aA2ASI5 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.91■□□□□ 0.3
Scn3aA2ASI5 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3aA2ASI5 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3aA2ASI5 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3aA2ASI5 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3aA2ASI5 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3aA2ASI5 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.91■□□□□ 0.3
Scn3aA2ASI5 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3aA2ASI5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Scn3aA2ASI5 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3aA2ASI5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3aA2ASI5 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3aA2ASI5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3aA2ASI5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3aA2ASI5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Gm6415-201ENSMUST00000118488 348 ntBASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Gm28630-201ENSMUST00000187806 498 ntBASIC16.9■□□□□ 0.3
Scn3aA2ASI5 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3aA2ASI5 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Scn3aA2ASI5 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Scn3aA2ASI5 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.88■□□□□ 0.29
Scn3aA2ASI5 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3aA2ASI5 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3aA2ASI5 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3aA2ASI5 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms