Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Gm15372-201ENSMUST00000120729 834 ntBASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Gm13836-201ENSMUST00000121159 501 ntBASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Mir7071-201ENSMUST00000184847 69 ntBASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc112A0AUP1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc112A0AUP1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Gm8655-201ENSMUST00000221159 852 ntBASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc112A0AUP1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc112A0AUP1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Ccdc112A0AUP1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.46■□□□□ 0.38
Ccdc112A0AUP1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc112A0AUP1 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Ccdc112A0AUP1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc112A0AUP1 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ccdc112A0AUP1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc112A0AUP1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms