Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Gm3880A0A1B0GSB3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Gm3880A0A1B0GSB3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Gm3880A0A1B0GSB3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Gm3880A0A1B0GSB3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Gm3880A0A1B0GSB3 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Gm3880A0A1B0GSB3 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC7.53□□□□□ -1.2
Gm3880A0A1B0GSB3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Gm3880A0A1B0GSB3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Gm3880A0A1B0GSB3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Gm3880A0A1B0GSB3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Gm3880A0A1B0GSB3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Gm3880A0A1B0GSB3 Gm37861-201ENSMUST00000193534 2869 ntBASIC7.53□□□□□ -1.2
Gm3880A0A1B0GSB3 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Gm3880A0A1B0GSB3 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Gm3880A0A1B0GSB3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
Gm3880A0A1B0GSB3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Gm3880A0A1B0GSB3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC7.52□□□□□ -1.2
Gm3880A0A1B0GSB3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.2
Gm3880A0A1B0GSB3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.2
Gm3880A0A1B0GSB3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.2
Gm3880A0A1B0GSB3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC7.52□□□□□ -1.2
Gm3880A0A1B0GSB3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Gm3880A0A1B0GSB3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Gm3880A0A1B0GSB3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
Gm3880A0A1B0GSB3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
Gm3880A0A1B0GSB3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Gm3880A0A1B0GSB3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Gm3880A0A1B0GSB3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Gm5422-201ENSMUST00000050717 2721 ntBASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Gm30238-201ENSMUST00000195528 2603 ntBASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Gm3880A0A1B0GSB3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Gm3880A0A1B0GSB3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Gm3880A0A1B0GSB3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Gm3880A0A1B0GSB3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC7.51□□□□□ -1.21
Gm3880A0A1B0GSB3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Gm3880A0A1B0GSB3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Gm3880A0A1B0GSB3 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Gm3880A0A1B0GSB3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Gm3880A0A1B0GSB3 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Gm3880A0A1B0GSB3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Gm3880A0A1B0GSB3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Gm3880A0A1B0GSB3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Gm3880A0A1B0GSB3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Gm3880A0A1B0GSB3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
Gm3880A0A1B0GSB3 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Gm3880A0A1B0GSB3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Gm3880A0A1B0GSB3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms