Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap99A0A140LIX9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap99A0A140LIX9 Gm15358-201ENSMUST00000119249 520 ntBASIC18.26■□□□□ 0.51
Cfap99A0A140LIX9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.26■□□□□ 0.51
Cfap99A0A140LIX9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cfap99A0A140LIX9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.26■□□□□ 0.51
Cfap99A0A140LIX9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap99A0A140LIX9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Cfap99A0A140LIX9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap99A0A140LIX9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.26■□□□□ 0.51
Cfap99A0A140LIX9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Cfap99A0A140LIX9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap99A0A140LIX9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap99A0A140LIX9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap99A0A140LIX9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap99A0A140LIX9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap99A0A140LIX9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Cfap99A0A140LIX9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap99A0A140LIX9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cfap99A0A140LIX9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap99A0A140LIX9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap99A0A140LIX9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.24■□□□□ 0.51
Cfap99A0A140LIX9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.24■□□□□ 0.51
Cfap99A0A140LIX9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap99A0A140LIX9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap99A0A140LIX9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap99A0A140LIX9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap99A0A140LIX9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap99A0A140LIX9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap99A0A140LIX9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap99A0A140LIX9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap99A0A140LIX9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cfap99A0A140LIX9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms