Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.55■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.55■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.55■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gm18246-201ENSMUST00000221023 728 ntBASIC18.55■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.55■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gm13597-201ENSMUST00000121239 375 ntBASIC18.53■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.53■□□□□ 0.56
Atg4a-psA0A0G2JFS9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.53■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atg4a-psA0A0G2JFS9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Atg4a-psA0A0G2JFS9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Atg4a-psA0A0G2JFS9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Atg4a-psA0A0G2JFS9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Atg4a-psA0A0G2JFS9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atg4a-psA0A0G2JFS9 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.51■□□□□ 0.55
Atg4a-psA0A0G2JFS9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
Atg4a-psA0A0G2JFS9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atg4a-psA0A0G2JFS9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atg4a-psA0A0G2JFS9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Atg4a-psA0A0G2JFS9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Atg4a-psA0A0G2JFS9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.51■□□□□ 0.55
Atg4a-psA0A0G2JFS9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atg4a-psA0A0G2JFS9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atg4a-psA0A0G2JFS9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.51■□□□□ 0.55
Atg4a-psA0A0G2JFS9 Gm18733-201ENSMUST00000173950 856 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms