Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Gm10293-201ENSMUST00000076317 1002 ntBASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Gm6316-201ENSMUST00000082064 1020 ntBASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Gm8784-201ENSMUST00000222096 1435 ntBASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.82□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Gm15372-201ENSMUST00000120729 834 ntBASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Gm12895-201ENSMUST00000122214 226 ntBASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 AC127302.2-201ENSMUST00000215212 268 ntBASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Gm7935-201ENSMUST00000100555 1278 ntBASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Cmtm5-203ENSMUST00000227441 610 ntBASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Gm7367-201ENSMUST00000057611 492 ntBASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Gm27528-202ENSMUST00000222916 2012 ntBASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Gm7669-201ENSMUST00000210184 1603 ntBASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv4-53A0A0G2JFC6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms