Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm15590-201ENSMUST00000078419 552 ntBASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gm8344-201ENSMUST00000119813 856 ntBASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms