Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.42□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.42□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gm10060-201ENSMUST00000212002 111 ntBASIC11.42□□□□□ -0.58
Trbv13-1A0A0B4J1P8 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.42□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.42□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.42□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.42□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Mir5131-201ENSMUST00000175426 93 ntBASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gm4535-201ENSMUST00000182274 558 ntBASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gm9172-201ENSMUST00000212092 954 ntBASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gm10355-201ENSMUST00000097146 517 ntBASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gm4459-201ENSMUST00000118750 468 ntBASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gm25406-201ENSMUST00000157599 105 ntBASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.4□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms