Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6n-6A0A075B6B2 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Gm45328-201ENSMUST00000210942 917 ntBASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6n-6A0A075B6B2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms