Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16A0A075B653 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.84□□□□□ -0.51
Trav16A0A075B653 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Mir1668-201ENSMUST00000184114 107 ntBASIC11.84□□□□□ -0.51
Trav16A0A075B653 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav16A0A075B653 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC11.84□□□□□ -0.51
Trav16A0A075B653 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.84□□□□□ -0.51
Trav16A0A075B653 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16A0A075B653 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav16A0A075B653 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Trav16A0A075B653 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav16A0A075B653 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav16A0A075B653 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Gm8520-201ENSMUST00000186517 868 ntBASIC11.83□□□□□ -0.52
Trav16A0A075B653 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Gm44430-201ENSMUST00000203376 995 ntBASIC11.83□□□□□ -0.52
Trav16A0A075B653 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav16A0A075B653 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.83□□□□□ -0.52
Trav16A0A075B653 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.83□□□□□ -0.52
Trav16A0A075B653 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16A0A075B653 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Gm30025-201ENSMUST00000218555 728 ntBASIC11.82□□□□□ -0.52
Trav16A0A075B653 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms