Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Gm6623-201ENSMUST00000173570 544 ntBASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 106.2 ms