Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Mir1668-201ENSMUST00000184114 107 ntBASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 AC153937.1-201ENSMUST00000218734 412 ntBASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trav13-2A0A075B649 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Gm37055-201ENSMUST00000191866 133 ntBASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 AL672049.1-201ENSMUST00000197943 91 ntBASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms