Protein–RNA interactions for Protein: A0A075B647

Trav9-2, T cell receptor alpha variable 9-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-2A0A075B647 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.49□□□□□ -0.57
Trav9-2A0A075B647 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.49□□□□□ -0.57
Trav9-2A0A075B647 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav9-2A0A075B647 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-2A0A075B647 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-2A0A075B647 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-2A0A075B647 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-2A0A075B647 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-2A0A075B647 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-2A0A075B647 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-2A0A075B647 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-2A0A075B647 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-2A0A075B647 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.49□□□□□ -0.57
Trav9-2A0A075B647 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-2A0A075B647 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-2A0A075B647 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-2A0A075B647 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-2A0A075B647 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-2A0A075B647 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav9-2A0A075B647 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav9-2A0A075B647 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Gm14722-201ENSMUST00000118943 689 ntBASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Gm5682-201ENSMUST00000173402 505 ntBASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Gm37153-201ENSMUST00000193637 231 ntBASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-2A0A075B647 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9-2A0A075B647 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9-2A0A075B647 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9-2A0A075B647 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms