Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav10nA0A075B622 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.58□□□□□ -0.23
Trav10nA0A075B622 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav10nA0A075B622 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav10nA0A075B622 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trav10nA0A075B622 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav10nA0A075B622 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav10nA0A075B622 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav10nA0A075B622 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav10nA0A075B622 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Gm14722-201ENSMUST00000118943 689 ntBASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.57□□□□□ -0.24
Trav10nA0A075B622 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav10nA0A075B622 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms