Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-1A0A075B5Z8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Gm5587-201ENSMUST00000206270 674 ntBASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Gm45328-201ENSMUST00000210942 917 ntBASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-1A0A075B5Z8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-1A0A075B5Z8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-1A0A075B5Z8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trav6-1A0A075B5Z8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-1A0A075B5Z8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-1A0A075B5Z8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav6-1A0A075B5Z8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav6-1A0A075B5Z8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-1A0A075B5Z8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-1A0A075B5Z8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm11950-201ENSMUST00000121615 838 ntBASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Rprl3-201ENSMUST00000157400 290 ntBASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms