Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm2272-201ENSMUST00000194903 582 ntBASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Thap2-203ENSMUST00000218989 527 ntBASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-1A0A075B5Z7 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm6736-201ENSMUST00000166583 948 ntBASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm24513-201ENSMUST00000174964 138 ntBASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm27397-201ENSMUST00000184997 107 ntBASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm10175-201ENSMUST00000086013 645 ntBASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-1A0A075B5Z7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm13597-201ENSMUST00000121239 375 ntBASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm5177-201ENSMUST00000183092 997 ntBASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Prob1-201ENSMUST00000097619 3021 ntBASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-1A0A075B5Z7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav5-1A0A075B5Z7 App-207ENSMUST00000227737 2827 ntBASIC13.08□□□□□ -0.31
Trav5-1A0A075B5Z7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav5-1A0A075B5Z7 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.08□□□□□ -0.31
Trav5-1A0A075B5Z7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav5-1A0A075B5Z7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms