Protein–RNA interactions for Protein: Q9Z1J2

Nek4, Serine/threonine-protein kinase Nek4, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek4Q9Z1J2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nek4Q9Z1J2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nek4Q9Z1J2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nek4Q9Z1J2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nek4Q9Z1J2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nek4Q9Z1J2 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.67■□□□□ 0.58
Nek4Q9Z1J2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.67■□□□□ 0.58
Nek4Q9Z1J2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek4Q9Z1J2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek4Q9Z1J2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.66■□□□□ 0.58
Nek4Q9Z1J2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek4Q9Z1J2 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.66■□□□□ 0.58
Nek4Q9Z1J2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek4Q9Z1J2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek4Q9Z1J2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nek4Q9Z1J2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nek4Q9Z1J2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nek4Q9Z1J2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nek4Q9Z1J2 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.65■□□□□ 0.58
Nek4Q9Z1J2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nek4Q9Z1J2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nek4Q9Z1J2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.65■□□□□ 0.58
Nek4Q9Z1J2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.65■□□□□ 0.58
Nek4Q9Z1J2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.65■□□□□ 0.58
Nek4Q9Z1J2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nek4Q9Z1J2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nek4Q9Z1J2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nek4Q9Z1J2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nek4Q9Z1J2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nek4Q9Z1J2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nek4Q9Z1J2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nek4Q9Z1J2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nek4Q9Z1J2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nek4Q9Z1J2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nek4Q9Z1J2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Nek4Q9Z1J2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Nek4Q9Z1J2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nek4Q9Z1J2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nek4Q9Z1J2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nek4Q9Z1J2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nek4Q9Z1J2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
Nek4Q9Z1J2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nek4Q9Z1J2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nek4Q9Z1J2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Nek4Q9Z1J2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nek4Q9Z1J2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nek4Q9Z1J2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nek4Q9Z1J2 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.64■□□□□ 0.57
Nek4Q9Z1J2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Nek4Q9Z1J2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nek4Q9Z1J2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nek4Q9Z1J2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nek4Q9Z1J2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nek4Q9Z1J2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Nek4Q9Z1J2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.64■□□□□ 0.57
Nek4Q9Z1J2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nek4Q9Z1J2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nek4Q9Z1J2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nek4Q9Z1J2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nek4Q9Z1J2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nek4Q9Z1J2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nek4Q9Z1J2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nek4Q9Z1J2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Nek4Q9Z1J2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nek4Q9Z1J2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nek4Q9Z1J2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nek4Q9Z1J2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.63■□□□□ 0.57
Nek4Q9Z1J2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nek4Q9Z1J2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nek4Q9Z1J2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nek4Q9Z1J2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nek4Q9Z1J2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nek4Q9Z1J2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nek4Q9Z1J2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nek4Q9Z1J2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nek4Q9Z1J2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nek4Q9Z1J2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 Gm15358-201ENSMUST00000119249 520 ntBASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 Gm45133-201ENSMUST00000207548 2773 ntBASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Nek4Q9Z1J2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nek4Q9Z1J2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms