Protein–RNA interactions for Protein: Q9WU22

Ptpn4, Tyrosine-protein phosphatase non-receptor type 4, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn4Q9WU22 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn4Q9WU22 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn4Q9WU22 Gm21362-201ENSMUST00000194272 928 ntBASIC15.13■□□□□ 0.01
Ptpn4Q9WU22 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn4Q9WU22 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn4Q9WU22 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.13■□□□□ 0.01
Ptpn4Q9WU22 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn4Q9WU22 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn4Q9WU22 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn4Q9WU22 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.13■□□□□ 0.01
Ptpn4Q9WU22 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptpn4Q9WU22 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Gm7213-201ENSMUST00000215977 950 ntBASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Gm21559-201ENSMUST00000220638 855 ntBASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Gm7367-201ENSMUST00000057611 492 ntBASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Gm8587-201ENSMUST00000076538 843 ntBASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ptpn4Q9WU22 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Gm6345-202ENSMUST00000180900 204 ntBASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptpn4Q9WU22 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Gm11336-201ENSMUST00000118168 334 ntBASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.1■□□□□ 0.01
Ptpn4Q9WU22 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms