Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col13a1Q9R1N9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Gm15427-201ENSMUST00000117288 531 ntBASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Mir6990-201ENSMUST00000183724 91 ntBASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col13a1Q9R1N9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col13a1Q9R1N9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col13a1Q9R1N9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col13a1Q9R1N9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col13a1Q9R1N9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col13a1Q9R1N9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col13a1Q9R1N9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col13a1Q9R1N9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.02□□□□□ -0.32
Col13a1Q9R1N9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col13a1Q9R1N9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col13a1Q9R1N9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col13a1Q9R1N9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col13a1Q9R1N9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col13a1Q9R1N9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col13a1Q9R1N9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Gm13823-201ENSMUST00000119930 345 ntBASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Gm27622-201ENSMUST00000183779 60 ntBASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col13a1Q9R1N9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms