Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nr2e3Q9QXZ7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Gm14140-201ENSMUST00000119999 995 ntBASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Gm18206-201ENSMUST00000207027 926 ntBASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.28■□□□□ 0.36
Nr2e3Q9QXZ7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Gm18246-201ENSMUST00000221023 728 ntBASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr2e3Q9QXZ7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nr2e3Q9QXZ7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nr2e3Q9QXZ7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nr2e3Q9QXZ7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nr2e3Q9QXZ7 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr2e3Q9QXZ7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.26■□□□□ 0.35
Nr2e3Q9QXZ7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.26■□□□□ 0.35
Nr2e3Q9QXZ7 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.26■□□□□ 0.35
Nr2e3Q9QXZ7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nr2e3Q9QXZ7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr2e3Q9QXZ7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Nr2e3Q9QXZ7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr2e3Q9QXZ7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr2e3Q9QXZ7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr2e3Q9QXZ7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr2e3Q9QXZ7 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.26■□□□□ 0.35
Nr2e3Q9QXZ7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr2e3Q9QXZ7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms