Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Gm43347-201ENSMUST00000200226 580 ntBASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Gm7461-201ENSMUST00000058918 827 ntBASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Sec61a2Q9JLR1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a2Q9JLR1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Gm7506-201ENSMUST00000207758 815 ntBASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a2Q9JLR1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms