Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rbfox1Q9JJ43 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Gm6659-201ENSMUST00000174752 547 ntBASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Gm27742-201ENSMUST00000184667 60 ntBASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rbfox1Q9JJ43 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Gm15165-201ENSMUST00000118140 502 ntBASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Gm15372-201ENSMUST00000120729 834 ntBASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rbfox1Q9JJ43 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rbfox1Q9JJ43 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rbfox1Q9JJ43 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rbfox1Q9JJ43 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rbfox1Q9JJ43 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rbfox1Q9JJ43 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rbfox1Q9JJ43 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms