Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smco4Q9JIS3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Smco4Q9JIS3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Smco4Q9JIS3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Smco4Q9JIS3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Gm7514-201ENSMUST00000209475 934 ntBASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco4Q9JIS3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smco4Q9JIS3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Matn2-206ENSMUST00000228570 2798 ntBASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms