Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Gm27742-201ENSMUST00000184667 60 ntBASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Gm44454-201ENSMUST00000198541 138 ntBASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccl28Q9JIL2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccl28Q9JIL2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl28Q9JIL2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Gm27704-201ENSMUST00000185094 107 ntBASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccl28Q9JIL2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl28Q9JIL2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms