Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Gm17807-201ENSMUST00000186869 298 ntBASIC16.17■□□□□ 0.18
Nup50Q9JIH2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.17■□□□□ 0.18
Nup50Q9JIH2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.17■□□□□ 0.18
Nup50Q9JIH2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Nup50Q9JIH2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup50Q9JIH2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nup50Q9JIH2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup50Q9JIH2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup50Q9JIH2 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.17■□□□□ 0.18
Nup50Q9JIH2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Nup50Q9JIH2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup50Q9JIH2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Nup50Q9JIH2 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.17■□□□□ 0.18
Nup50Q9JIH2 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.17■□□□□ 0.18
Nup50Q9JIH2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup50Q9JIH2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup50Q9JIH2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup50Q9JIH2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
Nup50Q9JIH2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup50Q9JIH2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Nup50Q9JIH2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nup50Q9JIH2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.16■□□□□ 0.18
Nup50Q9JIH2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Gm14859-201ENSMUST00000117752 357 ntBASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Gm11780-201ENSMUST00000136880 516 ntBASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup50Q9JIH2 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup50Q9JIH2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Celf4-206ENSMUST00000224553 1729 ntBASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup50Q9JIH2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Gm18669-201ENSMUST00000216049 778 ntBASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Gm6296-201ENSMUST00000222599 943 ntBASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup50Q9JIH2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms