Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.12□□□□□ -0.15
Dap3Q9ER88 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Gm10052-201ENSMUST00000168019 960 ntBASIC14.11□□□□□ -0.15
Dap3Q9ER88 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Gm7729-201ENSMUST00000050143 801 ntBASIC14.11□□□□□ -0.15
Dap3Q9ER88 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Dap3Q9ER88 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.11□□□□□ -0.15
Dap3Q9ER88 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.1□□□□□ -0.15
Dap3Q9ER88 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.09□□□□□ -0.15
Dap3Q9ER88 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Dap3Q9ER88 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Dap3Q9ER88 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.09□□□□□ -0.15
Dap3Q9ER88 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dap3Q9ER88 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Dap3Q9ER88 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dap3Q9ER88 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dap3Q9ER88 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Dap3Q9ER88 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dap3Q9ER88 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.09□□□□□ -0.15
Dap3Q9ER88 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Dap3Q9ER88 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.09□□□□□ -0.15
Dap3Q9ER88 Gm10252-201ENSMUST00000209541 832 ntBASIC14.09□□□□□ -0.15
Dap3Q9ER88 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dap3Q9ER88 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dap3Q9ER88 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dap3Q9ER88 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.09□□□□□ -0.15
Dap3Q9ER88 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dap3Q9ER88 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dap3Q9ER88 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dap3Q9ER88 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dap3Q9ER88 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dap3Q9ER88 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dap3Q9ER88 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Dap3Q9ER88 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Dap3Q9ER88 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Dap3Q9ER88 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms