Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cpsf1Q9EPU4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cpsf1Q9EPU4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.97■□□□□ 0.95
Cpsf1Q9EPU4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Gm6018-201ENSMUST00000216090 1306 ntBASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf1Q9EPU4 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC20.95■□□□□ 0.95
Cpsf1Q9EPU4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Cpsf1Q9EPU4 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.95
Cpsf1Q9EPU4 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Cpsf1Q9EPU4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Cpsf1Q9EPU4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC20.95■□□□□ 0.95
Cpsf1Q9EPU4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Cpsf1Q9EPU4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
Cpsf1Q9EPU4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf1Q9EPU4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf1Q9EPU4 Gm43195-201ENSMUST00000200614 2332 ntBASIC20.95■□□□□ 0.94
Cpsf1Q9EPU4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf1Q9EPU4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC20.95■□□□□ 0.94
Cpsf1Q9EPU4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf1Q9EPU4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Cpsf1Q9EPU4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf1Q9EPU4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf1Q9EPU4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf1Q9EPU4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf1Q9EPU4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf1Q9EPU4 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC20.95■□□□□ 0.94
Cpsf1Q9EPU4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf1Q9EPU4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC20.95■□□□□ 0.94
Cpsf1Q9EPU4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Cpsf1Q9EPU4 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf1Q9EPU4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC20.94■□□□□ 0.94
Cpsf1Q9EPU4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf1Q9EPU4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf1Q9EPU4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf1Q9EPU4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf1Q9EPU4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf1Q9EPU4 Mir449b-201ENSMUST00000104833 80 ntBASIC20.94■□□□□ 0.94
Cpsf1Q9EPU4 Gm13464-201ENSMUST00000119418 935 ntBASIC20.94■□□□□ 0.94
Cpsf1Q9EPU4 AA543401-201ENSMUST00000164248 1269 ntBASIC20.94■□□□□ 0.94
Cpsf1Q9EPU4 Gm4691-201ENSMUST00000182339 1000 ntBASIC20.94■□□□□ 0.94
Cpsf1Q9EPU4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf1Q9EPU4 Gm2451-201ENSMUST00000199447 999 ntBASIC20.94■□□□□ 0.94
Cpsf1Q9EPU4 Gm10290-201ENSMUST00000200451 999 ntBASIC20.94■□□□□ 0.94
Cpsf1Q9EPU4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC20.94■□□□□ 0.94
Cpsf1Q9EPU4 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf1Q9EPU4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf1Q9EPU4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf1Q9EPU4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf1Q9EPU4 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 Gm12017-201ENSMUST00000122453 1003 ntBASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 Gm27920-201ENSMUST00000183953 96 ntBASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 AC131710.1-201ENSMUST00000228336 990 ntBASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cpsf1Q9EPU4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms