Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Hmgn3Q9DCB1 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn3Q9DCB1 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Gm12008-201ENSMUST00000117791 755 ntBASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn3Q9DCB1 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 Gm27463-201ENSMUST00000183569 57 ntBASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn3Q9DCB1 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms