Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm7222-201ENSMUST00000117512 906 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm8825-201ENSMUST00000182565 998 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm4518-201ENSMUST00000182638 718 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm5264-201ENSMUST00000190584 848 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.23□□□□□ -0.13
Cdc40Q9DC48 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Psmb5-202ENSMUST00000227257 622 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cdc40Q9DC48 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdc40Q9DC48 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.21□□□□□ -0.13
Cdc40Q9DC48 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.21□□□□□ -0.13
Cdc40Q9DC48 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.21□□□□□ -0.13
Cdc40Q9DC48 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdc40Q9DC48 App-207ENSMUST00000227737 2827 ntBASIC14.21□□□□□ -0.14
Cdc40Q9DC48 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdc40Q9DC48 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdc40Q9DC48 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdc40Q9DC48 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cdc40Q9DC48 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms