Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Gtf3c6Q9D8P7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gtf3c6Q9D8P7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Gtf3c6Q9D8P7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gtf3c6Q9D8P7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gtf3c6Q9D8P7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gtf3c6Q9D8P7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Gm9103-201ENSMUST00000119371 405 ntBASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Gm27646-201ENSMUST00000183989 110 ntBASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Gm6296-201ENSMUST00000222599 943 ntBASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c6Q9D8P7 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Gtf3c6Q9D8P7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c6Q9D8P7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c6Q9D8P7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c6Q9D8P7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c6Q9D8P7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c6Q9D8P7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c6Q9D8P7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.39■□□□□ 0.21
Gtf3c6Q9D8P7 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.39■□□□□ 0.21
Gtf3c6Q9D8P7 Gm34391-201ENSMUST00000203706 907 ntBASIC16.39■□□□□ 0.21
Gtf3c6Q9D8P7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.39■□□□□ 0.21
Gtf3c6Q9D8P7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.39■□□□□ 0.21
Gtf3c6Q9D8P7 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.39■□□□□ 0.21
Gtf3c6Q9D8P7 AC154532.1-201ENSMUST00000227860 965 ntBASIC16.39■□□□□ 0.21
Gtf3c6Q9D8P7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c6Q9D8P7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c6Q9D8P7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.39■□□□□ 0.21
Gtf3c6Q9D8P7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c6Q9D8P7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c6Q9D8P7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c6Q9D8P7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 Gm45053-201ENSMUST00000206112 2499 ntBASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 Gm8318-201ENSMUST00000182954 872 ntBASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c6Q9D8P7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Gm27459-201ENSMUST00000184860 107 ntBASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Gm44357-201ENSMUST00000195897 142 ntBASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Gm19658-201ENSMUST00000196231 138 ntBASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Gm44367-201ENSMUST00000196836 138 ntBASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Gm44350-201ENSMUST00000197197 138 ntBASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Gm44390-201ENSMUST00000197533 144 ntBASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Gm44313-201ENSMUST00000198018 138 ntBASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Gm44486-201ENSMUST00000198508 138 ntBASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Gm44314-201ENSMUST00000199263 138 ntBASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Gm44394-201ENSMUST00000199558 138 ntBASIC16.37■□□□□ 0.21
Gtf3c6Q9D8P7 Gm44484-201ENSMUST00000199873 138 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms