Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.35■□□□□ 0.53
Chmp4cQ9D7F7 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4cQ9D7F7 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp4cQ9D7F7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.33■□□□□ 0.53
Chmp4cQ9D7F7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp4cQ9D7F7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp4cQ9D7F7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.33■□□□□ 0.52
Chmp4cQ9D7F7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Chmp4cQ9D7F7 Gm15165-201ENSMUST00000118140 502 ntBASIC18.33■□□□□ 0.52
Chmp4cQ9D7F7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Chmp4cQ9D7F7 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp4cQ9D7F7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp4cQ9D7F7 Efs-202ENSMUST00000227037 2540 ntBASIC18.33■□□□□ 0.52
Chmp4cQ9D7F7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp4cQ9D7F7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Chmp4cQ9D7F7 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp4cQ9D7F7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp4cQ9D7F7 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp4cQ9D7F7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp4cQ9D7F7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp4cQ9D7F7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Rprl3-201ENSMUST00000157400 290 ntBASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp4cQ9D7F7 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Chmp4cQ9D7F7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp4cQ9D7F7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp4cQ9D7F7 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp4cQ9D7F7 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Chmp4cQ9D7F7 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp4cQ9D7F7 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.31■□□□□ 0.52
Chmp4cQ9D7F7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp4cQ9D7F7 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.31■□□□□ 0.52
Chmp4cQ9D7F7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp4cQ9D7F7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp4cQ9D7F7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms