Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Mir6404-201ENSMUST00000183699 94 ntBASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Gm21559-201ENSMUST00000220638 855 ntBASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Gm8587-201ENSMUST00000076538 843 ntBASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1bQ9D0N7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Gm7367-201ENSMUST00000057611 492 ntBASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.4□□□□□ -0.1
Chaf1bQ9D0N7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Chaf1bQ9D0N7 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Chaf1bQ9D0N7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms