Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Mir8109-201ENSMUST00000184375 117 ntBASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Gm38266-201ENSMUST00000194931 421 ntBASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Gm43138-201ENSMUST00000199123 708 ntBASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 AC126253.1-201ENSMUST00000227974 824 ntBASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lysmd1Q9D0E3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 Gm23931-201ENSMUST00000103842 109 ntBASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 Mir877-201ENSMUST00000104738 85 ntBASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 Nsd1-205ENSMUST00000224693 852 ntBASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lysmd1Q9D0E3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lysmd1Q9D0E3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Lysmd1Q9D0E3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Lysmd1Q9D0E3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lysmd1Q9D0E3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Gm27341-201ENSMUST00000183570 106 ntBASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Gm27501-201ENSMUST00000183599 107 ntBASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Gm7561-201ENSMUST00000211203 886 ntBASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Mir433-201ENSMUST00000093564 124 ntBASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd1Q9D0E3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Gm27847-201ENSMUST00000183711 107 ntBASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Gm27375-201ENSMUST00000183799 107 ntBASIC16.19■□□□□ 0.18
Lysmd1Q9D0E3 Gm43830-201ENSMUST00000198760 1067 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms