Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1lQ9CXF7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Chd1lQ9CXF7 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 Mir5130-201ENSMUST00000175160 84 ntBASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1lQ9CXF7 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Chd1lQ9CXF7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
Chd1lQ9CXF7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1lQ9CXF7 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1lQ9CXF7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.29■□□□□ 0.36
Chd1lQ9CXF7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.29■□□□□ 0.36
Chd1lQ9CXF7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.29■□□□□ 0.36
Chd1lQ9CXF7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1lQ9CXF7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1lQ9CXF7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1lQ9CXF7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1lQ9CXF7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1lQ9CXF7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1lQ9CXF7 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.29■□□□□ 0.36
Chd1lQ9CXF7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1lQ9CXF7 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC17.29■□□□□ 0.36
Chd1lQ9CXF7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1lQ9CXF7 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.29■□□□□ 0.36
Chd1lQ9CXF7 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms