Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.47□□□□□ -0.09
Otud1Q9CUB6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.47□□□□□ -0.09
Otud1Q9CUB6 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Otud1Q9CUB6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otud1Q9CUB6 Gm5867-201ENSMUST00000063197 592 ntBASIC14.47□□□□□ -0.09
Otud1Q9CUB6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otud1Q9CUB6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otud1Q9CUB6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otud1Q9CUB6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Otud1Q9CUB6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otud1Q9CUB6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otud1Q9CUB6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otud1Q9CUB6 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otud1Q9CUB6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Otud1Q9CUB6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otud1Q9CUB6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otud1Q9CUB6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.46□□□□□ -0.09
Otud1Q9CUB6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.46□□□□□ -0.09
Otud1Q9CUB6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 Mir3113-201ENSMUST00000175478 76 ntBASIC14.46□□□□□ -0.09
Otud1Q9CUB6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Otud1Q9CUB6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Otud1Q9CUB6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Otud1Q9CUB6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Otud1Q9CUB6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Otud1Q9CUB6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Otud1Q9CUB6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Otud1Q9CUB6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Otud1Q9CUB6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Otud1Q9CUB6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Otud1Q9CUB6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.44□□□□□ -0.1
Otud1Q9CUB6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Otud1Q9CUB6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Otud1Q9CUB6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Otud1Q9CUB6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Otud1Q9CUB6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Otud1Q9CUB6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Otud1Q9CUB6 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.44□□□□□ -0.1
Otud1Q9CUB6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.44□□□□□ -0.1
Otud1Q9CUB6 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.44□□□□□ -0.1
Otud1Q9CUB6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Otud1Q9CUB6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Otud1Q9CUB6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Otud1Q9CUB6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Otud1Q9CUB6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Otud1Q9CUB6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Otud1Q9CUB6 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.44□□□□□ -0.1
Otud1Q9CUB6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Otud1Q9CUB6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Otud1Q9CUB6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Otud1Q9CUB6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.44□□□□□ -0.1
Otud1Q9CUB6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms