Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ska1Q9CPV1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Gm17808-201ENSMUST00000200859 894 ntBASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Ska1Q9CPV1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Gm6345-202ENSMUST00000180900 204 ntBASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ska1Q9CPV1 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms