Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn4Q99P72 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn4Q99P72 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rtn4Q99P72 Gm11779-201ENSMUST00000118541 368 ntBASIC19.62■□□□□ 0.73
Rtn4Q99P72 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC19.62■□□□□ 0.73
Rtn4Q99P72 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.62■□□□□ 0.73
Rtn4Q99P72 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn4Q99P72 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rtn4Q99P72 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn4Q99P72 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn4Q99P72 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn4Q99P72 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn4Q99P72 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn4Q99P72 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn4Q99P72 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn4Q99P72 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn4Q99P72 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rtn4Q99P72 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC19.62■□□□□ 0.73
Rtn4Q99P72 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4Q99P72 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4Q99P72 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4Q99P72 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4Q99P72 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.61■□□□□ 0.73
Rtn4Q99P72 Gm13036-201ENSMUST00000117799 748 ntBASIC19.61■□□□□ 0.73
Rtn4Q99P72 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.61■□□□□ 0.73
Rtn4Q99P72 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.61■□□□□ 0.73
Rtn4Q99P72 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.61■□□□□ 0.73
Rtn4Q99P72 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.61■□□□□ 0.73
Rtn4Q99P72 Mir6404-201ENSMUST00000183699 94 ntBASIC19.61■□□□□ 0.73
Rtn4Q99P72 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC19.61■□□□□ 0.73
Rtn4Q99P72 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4Q99P72 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4Q99P72 AC172027.1-201ENSMUST00000217659 337 ntBASIC19.61■□□□□ 0.73
Rtn4Q99P72 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4Q99P72 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4Q99P72 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4Q99P72 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4Q99P72 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4Q99P72 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4Q99P72 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.61■□□□□ 0.73
Rtn4Q99P72 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4Q99P72 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4Q99P72 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Gm45657-201ENSMUST00000211318 1349 ntBASIC19.6■□□□□ 0.73
Rtn4Q99P72 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.6■□□□□ 0.73
Rtn4Q99P72 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn4Q99P72 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.6■□□□□ 0.73
Rtn4Q99P72 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.6■□□□□ 0.73
Rtn4Q99P72 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rtn4Q99P72 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Gm7222-201ENSMUST00000117512 906 ntBASIC19.59■□□□□ 0.73
Rtn4Q99P72 Gm14740-201ENSMUST00000118538 1150 ntBASIC19.59■□□□□ 0.73
Rtn4Q99P72 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4Q99P72 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Rtn4Q99P72 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rtn4Q99P72 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Rtn4Q99P72 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rtn4Q99P72 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms