Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Gm2272-201ENSMUST00000194903 582 ntBASIC15.92■□□□□ 0.14
Tpgs1Q99MS8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpgs1Q99MS8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpgs1Q99MS8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpgs1Q99MS8 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpgs1Q99MS8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpgs1Q99MS8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpgs1Q99MS8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Tpgs1Q99MS8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpgs1Q99MS8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tpgs1Q99MS8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Gm43767-201ENSMUST00000198933 381 ntBASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpgs1Q99MS8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Mir8117-201ENSMUST00000184773 107 ntBASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpgs1Q99MS8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms