Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Gm25406-201ENSMUST00000157599 105 ntBASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Gm27867-201ENSMUST00000184778 125 ntBASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf111Q99ML9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Gm12895-201ENSMUST00000122214 226 ntBASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf111Q99ML9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf111Q99ML9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rnf111Q99ML9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf111Q99ML9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf111Q99ML9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf111Q99ML9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf111Q99ML9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf111Q99ML9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf111Q99ML9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf111Q99ML9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.85□□□□□ -0.03
Rnf111Q99ML9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.85□□□□□ -0.03
Rnf111Q99ML9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf111Q99ML9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf111Q99ML9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Rnf111Q99ML9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf111Q99ML9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf111Q99ML9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf111Q99ML9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf111Q99ML9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms