Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Rprl3-201ENSMUST00000157400 290 ntBASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Gm8825-201ENSMUST00000182565 998 ntBASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Gm4518-201ENSMUST00000182638 718 ntBASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Nkd1Q99MH6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkd1Q99MH6 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkd1Q99MH6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkd1Q99MH6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nkd1Q99MH6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.46□□□□□ -0.1
Nkd1Q99MH6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkd1Q99MH6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms