Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp1b1Q99LU0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Gm15372-201ENSMUST00000120729 834 ntBASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Gm7506-201ENSMUST00000207758 815 ntBASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp1b1Q99LU0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Chmp1b1Q99LU0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms