Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.82■□□□□ 0.6
RtcbQ99LF4 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.82■□□□□ 0.6
RtcbQ99LF4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RtcbQ99LF4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.81■□□□□ 0.6
RtcbQ99LF4 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.81■□□□□ 0.6
RtcbQ99LF4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.81■□□□□ 0.6
RtcbQ99LF4 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.81■□□□□ 0.6
RtcbQ99LF4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RtcbQ99LF4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RtcbQ99LF4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RtcbQ99LF4 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.8■□□□□ 0.6
RtcbQ99LF4 Gm12490-201ENSMUST00000120255 560 ntBASIC18.8■□□□□ 0.6
RtcbQ99LF4 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
RtcbQ99LF4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RtcbQ99LF4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.8■□□□□ 0.6
RtcbQ99LF4 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RtcbQ99LF4 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RtcbQ99LF4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.8■□□□□ 0.6
RtcbQ99LF4 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RtcbQ99LF4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.8■□□□□ 0.6
RtcbQ99LF4 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RtcbQ99LF4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RtcbQ99LF4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RtcbQ99LF4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
RtcbQ99LF4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RtcbQ99LF4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RtcbQ99LF4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RtcbQ99LF4 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.8■□□□□ 0.6
RtcbQ99LF4 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RtcbQ99LF4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RtcbQ99LF4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.8■□□□□ 0.6
RtcbQ99LF4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.79■□□□□ 0.6
RtcbQ99LF4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RtcbQ99LF4 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
RtcbQ99LF4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
RtcbQ99LF4 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.79■□□□□ 0.6
RtcbQ99LF4 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.79■□□□□ 0.6
RtcbQ99LF4 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.79■□□□□ 0.6
RtcbQ99LF4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RtcbQ99LF4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms