Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc4Q99J62 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Gm5779-201ENSMUST00000218467 910 ntBASIC17.61■□□□□ 0.41
Rfc4Q99J62 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.61■□□□□ 0.41
Rfc4Q99J62 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rfc4Q99J62 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfc4Q99J62 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.61■□□□□ 0.41
Rfc4Q99J62 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.61■□□□□ 0.41
Rfc4Q99J62 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Gm12428-201ENSMUST00000119844 727 ntBASIC17.6■□□□□ 0.41
Rfc4Q99J62 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.6■□□□□ 0.41
Rfc4Q99J62 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfc4Q99J62 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.6■□□□□ 0.41
Rfc4Q99J62 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.6■□□□□ 0.41
Rfc4Q99J62 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.6■□□□□ 0.41
Rfc4Q99J62 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.6■□□□□ 0.41
Rfc4Q99J62 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rfc4Q99J62 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.59■□□□□ 0.41
Rfc4Q99J62 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfc4Q99J62 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Rfc4Q99J62 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfc4Q99J62 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.58■□□□□ 0.41
Rfc4Q99J62 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfc4Q99J62 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfc4Q99J62 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfc4Q99J62 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.58■□□□□ 0.41
Rfc4Q99J62 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.58■□□□□ 0.41
Rfc4Q99J62 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfc4Q99J62 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfc4Q99J62 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfc4Q99J62 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms