Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Thumpd1Q99J36 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Mir770-201ENSMUST00000103252 94 ntBASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thumpd1Q99J36 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Thumpd1Q99J36 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.64□□□□□ -0.23
Thumpd1Q99J36 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.64□□□□□ -0.23
Thumpd1Q99J36 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Gm8825-201ENSMUST00000182565 998 ntBASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Gm4518-201ENSMUST00000182638 718 ntBASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Thumpd1Q99J36 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms