Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Col20a1Q923P0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col20a1Q923P0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.01■□□□□ 0.47
Col20a1Q923P0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col20a1Q923P0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Col20a1Q923P0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Col20a1Q923P0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.01■□□□□ 0.47
Col20a1Q923P0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col20a1Q923P0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col20a1Q923P0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col20a1Q923P0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Col20a1Q923P0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col20a1Q923P0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col20a1Q923P0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col20a1Q923P0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18■□□□□ 0.47
Col20a1Q923P0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18■□□□□ 0.47
Col20a1Q923P0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18■□□□□ 0.47
Col20a1Q923P0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18■□□□□ 0.47
Col20a1Q923P0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col20a1Q923P0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col20a1Q923P0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18■□□□□ 0.47
Col20a1Q923P0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18■□□□□ 0.47
Col20a1Q923P0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Col20a1Q923P0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col20a1Q923P0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col20a1Q923P0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col20a1Q923P0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col20a1Q923P0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Col20a1Q923P0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Col20a1Q923P0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Col20a1Q923P0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Col20a1Q923P0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col20a1Q923P0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col20a1Q923P0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Col20a1Q923P0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Col20a1Q923P0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.99■□□□□ 0.47
Col20a1Q923P0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.99■□□□□ 0.47
Col20a1Q923P0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col20a1Q923P0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col20a1Q923P0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col20a1Q923P0 Gm18889-201ENSMUST00000174284 929 ntBASIC17.99■□□□□ 0.47
Col20a1Q923P0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.99■□□□□ 0.47
Col20a1Q923P0 Mir6990-201ENSMUST00000183724 91 ntBASIC17.99■□□□□ 0.47
Col20a1Q923P0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.99■□□□□ 0.47
Col20a1Q923P0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Col20a1Q923P0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col20a1Q923P0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Col20a1Q923P0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col20a1Q923P0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.99■□□□□ 0.47
Col20a1Q923P0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Col20a1Q923P0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Col20a1Q923P0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col20a1Q923P0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.99■□□□□ 0.47
Col20a1Q923P0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.99■□□□□ 0.47
Col20a1Q923P0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col20a1Q923P0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Col20a1Q923P0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col20a1Q923P0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Col20a1Q923P0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Gm5312-201ENSMUST00000203728 547 ntBASIC17.98■□□□□ 0.47
Col20a1Q923P0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col20a1Q923P0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.98■□□□□ 0.47
Col20a1Q923P0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.98■□□□□ 0.47
Col20a1Q923P0 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Gm15920-201ENSMUST00000118998 402 ntBASIC17.98■□□□□ 0.47
Col20a1Q923P0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.98■□□□□ 0.47
Col20a1Q923P0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Gm18057-201ENSMUST00000208220 503 ntBASIC17.98■□□□□ 0.47
Col20a1Q923P0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.98■□□□□ 0.47
Col20a1Q923P0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col20a1Q923P0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col20a1Q923P0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col20a1Q923P0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col20a1Q923P0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col20a1Q923P0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col20a1Q923P0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col20a1Q923P0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Col20a1Q923P0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
Col20a1Q923P0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col20a1Q923P0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col20a1Q923P0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col20a1Q923P0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Col20a1Q923P0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.97■□□□□ 0.47
Col20a1Q923P0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms