Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Mir6404-201ENSMUST00000183699 94 ntBASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp1aQ921W0 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Gm13436-201ENSMUST00000120418 567 ntBASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Mir5130-201ENSMUST00000175160 84 ntBASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.53□□□□□ -0.24
Chmp1aQ921W0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1aQ921W0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.52□□□□□ -0.24
Chmp1aQ921W0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp1aQ921W0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Chmp1aQ921W0 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.52□□□□□ -0.24
Chmp1aQ921W0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp1aQ921W0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Chmp1aQ921W0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp1aQ921W0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp1aQ921W0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp1aQ921W0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp1aQ921W0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp1aQ921W0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Chmp1aQ921W0 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.52□□□□□ -0.24
Chmp1aQ921W0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Chmp1aQ921W0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp1aQ921W0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms